Sequential Structure Alignment Program kitap kapağı
Kitap başlığı:

Sequential Structure Alignment Program

Dynamic programming, Alpha and beta carbon, Structural alignment

Serv (2012-01-07 )

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ISBN-13:

978-613-9-12874-7

ISBN-10:
6139128749
EAN:
9786139128747
Kitabın dili:
İngilizce
Özet:
Please note that the content of this book primarily consists of articles available from Wikipedia or other free sources online. The SSAP (Sequential Structure Alignment Program) method uses double dynamic programming to produce a structural alignment based on atom-to-atom vectors in structure space. Instead of the alpha carbons typically used in structural alignment, SSAP constructs its vectors from the beta carbons for all residues except glycine, a method which thus takes into account the rotameric state of each residue as well as its location along the backbone. SSAP works by first constructing a series of inter-residue distance vectors between each residue and its nearest non-contiguous neighbors on each protein. A series of matrices are then constructed containing the vector differences between neighbors for each pair of residues for which vectors were constructed. Dynamic programming applied to each resulting matrix determines a series of optimal local alignments which are then summed into a "summary" matrix to which dynamic programming is applied again to determine the overall structural alignment.
Yayınevi:
Serv
Websitesi:
http://www.betascript-publishing.com
Düzenleyen:
Oscar Sundara
Sayfa sayısı:
92
Yayın tarihi:
2012-01-07
Hisse:
Mevcut
Kategori:
Matematik
Fiyat:
34.00 €
Anahtar kelimeler:
dynamic, programming, Alpha, Beta, carbon, structural, Alignment

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